Introduction to modelling infectious disease and health economics in R
by Lander Willem and colleagues from the University of Antwerp and Hasselt University as part of the SIMID consortium
Required software
Tutorials
- Introduction to RStudio
- Introduction to R
- Introduction to infectious disease modelling with R
- Introduction to Individual-Based Models (IBMs) using R
- IBM with random walks
- IBM with location-specific mixing
- CEA: influenza
- CEA: parametric uncertainty
- CEA: influenza with uncertainty
- CEA: RSV
Extra:
We provide some background literature here.
The R and SIR tutorials are based on work from Sebastian Funk, Gwen Knight and Anton Camacho from the London School of Hygiene & Tropical Medicine. We fully acknowledge their work and are thankfull for making them open-source via GitHub.